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Robust multi-group gene set analysis with few replicates

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DOI
10.1186/s12859-016-1403-0
Mishra, Pashupati P.; Medlar, Alan; Holm, Liisa; Törönen, Petri
BMC Bioinformatics2016Publicationer information ikon

Activated immune-inflammatory pathways are associated with long-standing depressive symptoms: Evidence from gene-set enrichment analyses in the Young Finns Study

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DOI
10.1016/j.jpsychires.2015.09.017
Elovainio, Marko; Taipale, Tuukka; Seppälä, Iilkka; Mononen, Nina; Raitoharju, Emma; Jokela, Markus;...
Journal of psychiatric research2015Publicationer information ikon

EnrichIntersect:An R package for custom set enrichment analysis and interactive visualization of intersecting sets

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DOI
10.1093/bioadv/vbac073
Zhao, Zhi; Zucknick, Manuela; Aittokallio, Tero
Bioinformatics advances2022Publicationer information ikon

Gene Set Enrichment Analysis Identifies LIF as a Negative Regulator of Human Th2 Cell Differentiation

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DOI
10.1038/srep00464
Ullah, Ubaid;Tripathi, Parul;Sahoo, Naresh;Lahesmaa, Riitta ;Rao, Kanury V. S.
Scientific Reports2012Publicationer information ikon

On Combining the Stubborn Set Method with the Sleep Set Method

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Varpaaniemi, K.
SPRINGER1994Publicationer information ikon

MPEA: Metabolite pathway enrichment analysis

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DOI
10.1093/bioinformatics/btr278
Kankainen, Matti; Gopalacharyulu, Peddinti; Holm, Liisa; Orešič, Matej
Bioinformatics2011Publicationer information ikon

MPEA-metabolite pathway enrichment analysis

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DOI
10.1093/bioinformatics/btr278
Kankainen, Matti; Gopalacharyulu, Peddinti; Holm, Liisa; Oresic, Matej
Bioinformatics Trends2011Publicationer information ikon

Varanto: variant enrichment analysis and annotation

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DOI
10.1093/bioinformatics/btz046
Timonen, O; Särkkä, M; Fülöp, T; Mattsson, A; Kekäläinen, J; Paananen, J
Bioinformatics2019Publicationer information ikon

The Sleep Set Method Revisited

Referentgranskad
Varpaaniemi, K.
Humboldt University of Berlin1994Publicationer information ikon

Answer Set Optimization

Referentgranskad
Brewka, Gerhard; Niemelä, Ilkka; Truszczynski, Miroslaw
-2003

Robust multi-group gene set analysis with few replicates

Referentgranskad
Öppen tillgång
DOI
10.1186/s12859-016-1403-0
2016

Activated immune-inflammatory pathways are associated with long-standing depressive symptoms: Evidence from gene-set enrichment analyses in the Young Finns Study

Referentgranskad
DOI
10.1016/j.jpsychires.2015.09.017
2015

EnrichIntersect:An R package for custom set enrichment analysis and interactive visualization of intersecting sets

Referentgranskad
Öppen tillgång
DOI
10.1093/bioadv/vbac073
2022

Gene Set Enrichment Analysis Identifies LIF as a Negative Regulator of Human Th2 Cell Differentiation

Referentgranskad
Öppen tillgång
DOI
10.1038/srep00464
2012

On Combining the Stubborn Set Method with the Sleep Set Method

Referentgranskad
1994

MPEA: Metabolite pathway enrichment analysis

Referentgranskad
DOI
10.1093/bioinformatics/btr278
2011

MPEA-metabolite pathway enrichment analysis

Referentgranskad
DOI
10.1093/bioinformatics/btr278
2011

Varanto: variant enrichment analysis and annotation

Referentgranskad
Öppen tillgång
DOI
10.1093/bioinformatics/btz046
2019

The Sleep Set Method Revisited

Referentgranskad
1994

Answer Set Optimization

Referentgranskad
2003